Index

_

__class_vars__ (sovabids.errors.ApplyError.DataModel attribute) (sovabids.errors.ConvertError.DataModel attribute) (sovabids.errors.FileListError.DataModel attribute) (sovabids.errors.RulesError.DataModel attribute) (sovabids.errors.SaveError.DataModel attribute) __private_attributes__ (sovabids.errors.ApplyError.DataModel attribute) (sovabids.errors.ConvertError.DataModel attribute) (sovabids.errors.FileListError.DataModel attribute) (sovabids.errors.RulesError.DataModel attribute) (sovabids.errors.SaveError.DataModel attribute) __pydantic_complete__ (sovabids.errors.ApplyError.DataModel attribute) (sovabids.errors.ConvertError.DataModel attribute) (sovabids.errors.FileListError.DataModel attribute) (sovabids.errors.RulesError.DataModel attribute) (sovabids.errors.SaveError.DataModel attribute) __pydantic_computed_fields__ (sovabids.errors.ApplyError.DataModel attribute) (sovabids.errors.ConvertError.DataModel attribute) (sovabids.errors.FileListError.DataModel attribute) (sovabids.errors.RulesError.DataModel attribute) (sovabids.errors.SaveError.DataModel attribute) __pydantic_core_schema__ (sovabids.errors.ApplyError.DataModel attribute) (sovabids.errors.ConvertError.DataModel attribute) (sovabids.errors.FileListError.DataModel attribute) (sovabids.errors.RulesError.DataModel attribute) (sovabids.errors.SaveError.DataModel attribute) __pydantic_custom_init__ (sovabids.errors.ApplyError.DataModel attribute) (sovabids.errors.ConvertError.DataModel attribute) (sovabids.errors.FileListError.DataModel attribute) (sovabids.errors.RulesError.DataModel attribute) (sovabids.errors.SaveError.DataModel attribute) __pydantic_decorators__ (sovabids.errors.ApplyError.DataModel attribute) (sovabids.errors.ConvertError.DataModel attribute) (sovabids.errors.FileListError.DataModel attribute) (sovabids.errors.RulesError.DataModel attribute) (sovabids.errors.SaveError.DataModel attribute) __pydantic_extra__ (sovabids.errors.ApplyError.DataModel attribute) (sovabids.errors.ConvertError.DataModel attribute) (sovabids.errors.FileListError.DataModel attribute) (sovabids.errors.RulesError.DataModel attribute) (sovabids.errors.SaveError.DataModel attribute) __pydantic_fields__ (sovabids.errors.ApplyError.DataModel attribute) (sovabids.errors.ConvertError.DataModel attribute) (sovabids.errors.FileListError.DataModel attribute) (sovabids.errors.RulesError.DataModel attribute) (sovabids.errors.SaveError.DataModel attribute) __pydantic_fields_set__ (sovabids.errors.ApplyError.DataModel attribute) (sovabids.errors.ConvertError.DataModel attribute) (sovabids.errors.FileListError.DataModel attribute) (sovabids.errors.RulesError.DataModel attribute) (sovabids.errors.SaveError.DataModel attribute) __pydantic_generic_metadata__ (sovabids.errors.ApplyError.DataModel attribute) (sovabids.errors.ConvertError.DataModel attribute) (sovabids.errors.FileListError.DataModel attribute) (sovabids.errors.RulesError.DataModel attribute) (sovabids.errors.SaveError.DataModel attribute) __pydantic_parent_namespace__ (sovabids.errors.ApplyError.DataModel attribute) (sovabids.errors.ConvertError.DataModel attribute) (sovabids.errors.FileListError.DataModel attribute) (sovabids.errors.RulesError.DataModel attribute) (sovabids.errors.SaveError.DataModel attribute) __pydantic_post_init__ (sovabids.errors.ApplyError.DataModel attribute) (sovabids.errors.ConvertError.DataModel attribute) (sovabids.errors.FileListError.DataModel attribute) (sovabids.errors.RulesError.DataModel attribute) (sovabids.errors.SaveError.DataModel attribute) __pydantic_private__ (sovabids.errors.ApplyError.DataModel attribute) (sovabids.errors.ConvertError.DataModel attribute) (sovabids.errors.FileListError.DataModel attribute) (sovabids.errors.RulesError.DataModel attribute) (sovabids.errors.SaveError.DataModel attribute)

__pydantic_root_model__ (sovabids.errors.ApplyError.DataModel attribute) (sovabids.errors.ConvertError.DataModel attribute) (sovabids.errors.FileListError.DataModel attribute) (sovabids.errors.RulesError.DataModel attribute) (sovabids.errors.SaveError.DataModel attribute) __pydantic_serializer__ (sovabids.errors.ApplyError.DataModel attribute) (sovabids.errors.ConvertError.DataModel attribute) (sovabids.errors.FileListError.DataModel attribute) (sovabids.errors.RulesError.DataModel attribute) (sovabids.errors.SaveError.DataModel attribute) __pydantic_validator__ (sovabids.errors.ApplyError.DataModel attribute) (sovabids.errors.ConvertError.DataModel attribute) (sovabids.errors.FileListError.DataModel attribute) (sovabids.errors.RulesError.DataModel attribute) (sovabids.errors.SaveError.DataModel attribute) __signature__ (sovabids.errors.ApplyError.DataModel attribute) (sovabids.errors.ConvertError.DataModel attribute) (sovabids.errors.FileListError.DataModel attribute) (sovabids.errors.RulesError.DataModel attribute) (sovabids.errors.SaveError.DataModel attribute) __version__ (in module sovabids) _convert_worker() (sovabids.tui.ConvertPane method) _excepthook() (in module sovabids.loggers) _ext_count_worker() (sovabids.tui.RulesPane method) _fields (sovabids.tui.FilesListScreen attribute) _filepath (sovabids.tui.ChannelNamesScreen attribute) _files (sovabids.tui.FilesListScreen attribute) _flatten_dict() (in module sovabids.tui) _gen_worker() (sovabids.tui.MappingsPane method) _generate() (sovabids.tui.MappingsPane method) _get_files() (in module sovabids.files) _get_io_example() (sovabids.tui.RulesPane method) _get_mode_and_fields() (sovabids.tui.RulesPane method) _get_source() (sovabids.tui.RulesPane method) _load_worker() (sovabids.tui.ChannelNamesScreen method) _log() (sovabids.tui.ConvertPane method) _mapping_data (sovabids.tui.SovabidsApp attribute) _mappings (sovabids.tui.MappingsPane attribute) _matched_files (sovabids.tui.RulesPane attribute) _mode (sovabids.tui.FilesListScreen attribute) _modify_entities_of_placeholder_pattern() (in module sovabids.parsers) _on_dir_picked() (sovabids.tui.SovabidsApp method) _pattern (sovabids.tui.FilesListScreen attribute) _pending_input_id (sovabids.tui.SovabidsApp attribute) _populate() (sovabids.tui.ChannelNamesScreen method) _populate_table() (sovabids.tui.MappingsPane method) _preview_lock (sovabids.tui.RulesPane attribute) _preview_timer (sovabids.tui.RulesPane attribute) _preview_worker() (sovabids.tui.RulesPane method) _psd_worker() (sovabids.tui.RulesPane method) _regex_match() (in module sovabids.rules) _run_ext_count() (sovabids.tui.RulesPane method) _run_preview() (sovabids.tui.RulesPane method) _save_mappings_yaml() (sovabids.tui.MappingsPane method) _schedule_ext_count() (sovabids.tui.RulesPane method) _schedule_preview() (sovabids.tui.RulesPane method) _set_preview() (sovabids.tui.RulesPane method) _set_status() (sovabids.tui.MappingsPane method) _show_extraction() (sovabids.tui.FilesListScreen method) _start (sovabids.tui.DirPickerScreen attribute) _start_convert() (sovabids.tui.ConvertPane method) _UNICODE_DASHES (in module sovabids.misc) _update_show_files_btn() (sovabids.tui.RulesPane method) _write_yaml() (in module sovabids.files)

A

action_save_rules() (sovabids.tui.SovabidsApp method) api (in module sovabids.sovarpc) app (in module sovabids.sovarpc) apply_rules() (in module sovabids.rules) (in module sovabids.sovarpc)

apply_rules_to_single_file() (in module sovabids.rules) (in module sovabids.sovarpc) ApplyError ApplyError.DataModel (class in sovabids.errors)

B

BINDINGS (sovabids.tui.SovabidsApp attribute)

C

ChannelNamesScreen (class in sovabids.tui) CODE (sovabids.errors.ApplyError attribute) (sovabids.errors.ConvertError attribute) (sovabids.errors.FileListError attribute) (sovabids.errors.RulesError attribute) (sovabids.errors.SaveError attribute) compose() (sovabids.tui.ChannelNamesScreen method) (sovabids.tui.ConvertPane method) (sovabids.tui.DirPickerScreen method) (sovabids.tui.FilesListScreen method) (sovabids.tui.MappingsPane method) (sovabids.tui.RulesPane method) (sovabids.tui.SetupPane method) (sovabids.tui.SovabidsApp method)

convert_them() (in module sovabids.convert) (in module sovabids.sovarpc) ConvertError ConvertError.DataModel (class in sovabids.errors) ConvertPane (class in sovabids.tui) CSS (sovabids.tui.SovabidsApp attribute)

D

deep_get() (in module sovabids.dicts) deep_merge() (in module sovabids.dicts) deep_merge_N() (in module sovabids.dicts) DEFAULT_CSS (sovabids.tui.ChannelNamesScreen attribute) (sovabids.tui.ConvertPane attribute) (sovabids.tui.DirPickerScreen attribute) (sovabids.tui.FilesListScreen attribute) (sovabids.tui.MappingsPane attribute) (sovabids.tui.RulesPane attribute) (sovabids.tui.SetupPane attribute)

details (sovabids.errors.ApplyError.DataModel attribute) (sovabids.errors.ConvertError.DataModel attribute) (sovabids.errors.FileListError.DataModel attribute) (sovabids.errors.RulesError.DataModel attribute) (sovabids.errors.SaveError.DataModel attribute) DirPickerScreen (class in sovabids.tui) download() (in module sovabids.files)

F

FileListError FileListError.DataModel (class in sovabids.errors) FilesListScreen (class in sovabids.tui)

find_bidsroot() (in module sovabids.parsers) flat_paren_counter() (in module sovabids.misc) flatten() (in module sovabids.dicts) from_io_example() (in module sovabids.heuristics)

G

generate_1_over_f_noise() (in module sovabids.datasets) get_dummy_raw() (in module sovabids.datasets) get_files() (in module sovabids.rules) (in module sovabids.sovarpc)

get_info_from_path() (in module sovabids.rules) get_num_digits() (in module sovabids.misc) get_rules() (sovabids.tui.RulesPane method) get_sova2coin_bidsmap() (in module sovabids.schemas) get_values() (sovabids.tui.SetupPane method)

H

handle_unicode_dashes() (in module sovabids.misc)

L

lemon_bidscoin_prepare() (in module sovabids.datasets) lemon_prepare() (in module sovabids.datasets) load_rules() (in module sovabids.rules) (in module sovabids.sovarpc)

LOGGER (in module sovabids.convert) (in module sovabids.rules)

M

main() (in module sovabids.sovarpc) (in module sovabids.tui) make_dummy_dataset() (in module sovabids.datasets) MappingsPane (class in sovabids.tui) MESSAGE (sovabids.errors.ApplyError attribute) (sovabids.errors.ConvertError attribute) (sovabids.errors.FileListError attribute) (sovabids.errors.RulesError attribute) (sovabids.errors.SaveError attribute) module sovabids sovabids.bids sovabids.convert sovabids.datasets sovabids.dicts sovabids.errors sovabids.files sovabids.heuristics sovabids.loggers sovabids.misc sovabids.parsers sovabids.rules sovabids.schemas sovabids.settings sovabids.sovarpc sovabids.tui

N

nested_notation_to_tree() (in module sovabids.dicts)

NULL_VALUES (in module sovabids.settings)

O

on_button_pressed() (sovabids.tui.ChannelNamesScreen method) (sovabids.tui.ConvertPane method) (sovabids.tui.DirPickerScreen method) (sovabids.tui.FilesListScreen method) (sovabids.tui.MappingsPane method) (sovabids.tui.RulesPane method) (sovabids.tui.SetupPane method) on_data_table_row_highlighted() (sovabids.tui.FilesListScreen method)

on_directory_tree_directory_selected() (sovabids.tui.DirPickerScreen method) on_input_changed() (sovabids.tui.RulesPane method) on_key() (sovabids.tui.ChannelNamesScreen method) (sovabids.tui.FilesListScreen method) on_mount() (sovabids.tui.ChannelNamesScreen method) (sovabids.tui.FilesListScreen method) (sovabids.tui.MappingsPane method) on_radio_set_changed() (sovabids.tui.RulesPane method) on_select_changed() (sovabids.tui.RulesPane method)

P

parse_entities_from_bidspath() (in module sovabids.parsers) parse_entity_from_bidspath() (in module sovabids.parsers) parse_from_placeholder() (in module sovabids.parsers)

parse_from_regex() (in module sovabids.parsers) parse_path_pattern_from_entities() (in module sovabids.parsers) placeholder_to_regex() (in module sovabids.parsers)

R

replace_brainvision_filename() (in module sovabids.datasets) REPO_PATH (in module sovabids.settings)

RulesError RulesError.DataModel (class in sovabids.errors) RulesPane (class in sovabids.tui)

S

save_dummy_cnt() (in module sovabids.datasets) save_dummy_vhdr() (in module sovabids.datasets) save_mappings() (in module sovabids.sovarpc) save_rules() (in module sovabids.sovarpc) SaveError SaveError.DataModel (class in sovabids.errors) SECTION_STRING (in module sovabids.settings) setup_logging() (in module sovabids.loggers) SetupPane (class in sovabids.tui) sovabids module sovabids.bids module sovabids.convert module sovabids.datasets module sovabids.dicts module sovabids.errors module sovabids.files module

sovabids.heuristics module sovabids.loggers module sovabids.misc module sovabids.parsers module sovabids.rules module sovabids.schemas module sovabids.settings module sovabids.sovarpc module sovabids.tui module SOVABIDS_PATH (in module sovabids.settings) SovabidsApp (class in sovabids.tui) sovaconvert() (in module sovabids.convert) sovapply() (in module sovabids.rules) SUB_TITLE (sovabids.tui.SovabidsApp attribute) SUPPORTED_EXTENSIONS (in module sovabids.settings)

T

TITLE (sovabids.tui.SovabidsApp attribute)

U

update_dataset_description() (in module sovabids.bids)